Category Archives: Genome Data Viewer
Try out our new table download options from the NCBI genome browsers and sequence viewers!
Have you ever wanted a list of the genes you’re looking at in the browser – maybe to give you a starting point for candidate gene analysis, or to cross-reference with other data? In response to your feedback and helpful … Continue reading
Posted by in Genome Browser, Genome Data Viewer, Sequence Viewer, What's New
NCBI on YouTube: Get the most out of NCBI resources with these videos
Check out the latest videos on YouTube to learn how to best use NCBI graphical viewers, SRA, PGAP, and other resources. Genome Data Viewer: Analyzing Remote BAM Alignment Files and Other Tips This video shows you how to upload remote … Continue reading
Posted by in 1000 Genomes, API, ClinVar, dbgap, dbGaP Allele Frequency Aggregator (ALFA), dbSNP, DNA-Seq, ExAC, GDV, Genome, Genome Data Viewer, GnomAD, human variant data, PGAP, prokaryotic genome annotation, RNA-Seq, SPDI, SRA, TopMed, What's New, youtube
NCBI on YouTube: Get the most out of NCBI resources with these videos
Check out the latest videos on YouTube to learn how to best use NCBI graphical viewers, SRA, PGAP, and other resources. Genome Data Viewer: Analyzing Remote BAM Alignment Files and Other Tips This video shows you how to upload remote … Continue reading
Posted by in 1000 Genomes, API, ClinVar, dbgap, dbGaP Allele Frequency Aggregator (ALFA), dbSNP, DNA-Seq, ExAC, GDV, Genome, Genome Data Viewer, GnomAD, human variant data, PGAP, prokaryotic genome annotation, RNA-Seq, SPDI, SRA, TopMed, What's New, youtube
NCBI retires Clone DB
Earlier this year, NCBI announced plans to retire the Clone DB web interface. Pursuant to this retirement, starting on May 27, 2019, all web pages associated with Clone DB and CloneFinder will redirect to this blog post. Links to Clone DB … Continue reading
Posted by in Clone DB, Genome Data Viewer, What's New
Easily configure gene feature modes in NCBI’s graphical sequence displays
Did you know you can easily switch between gene feature modes in NCBI’s graphical sequence displays like Sequence Viewer and GDV? You may need to configure gene tracks to suit your needs if, for example, you need to conduct analyses … Continue reading
Posted by in Genome Data Viewer, Quick Tips, Sequence Viewer
Change the way your graphs look with Genome Data Viewer’s enhanced settings
If you need to change your graph type – say, from histogram to line graph or a heat map – in Genome Data Viewer (GDV), you can now do so with a few clicks. Click on the track name of any graph track to … Continue reading
Posted by in Genome Data Viewer, Quick Tips
Check out improved tooltips in NCBI’s genome browsers and sequence displays!
We’ve recently improved the tooltips for gene features in NCBI’s graphical sequence displays in Genome Data Viewer (GDV) and on many resource pages, such as Gene and dbSNP. These enhancements include quick details and helpful links about the feature and gene. Tooltips (Figure 1) … Continue reading
Posted by in Genome Data Viewer, What's New
Join NCBI at PAG in San Diego, January 12–16, 2019
Next week, NCBI staff will attend the Plant and Animal Genome (PAG) Conference. We have several activities planned, including 1 booth (#223), 4 workshops, 1 talk and 2 posters. Read on to learn more about what you can look forward … Continue reading
November 28 NCBI Minute: Getting the Most from Track Hubs in NCBI’s Genome Data Viewer (GDV)
This webinar is intended for both new and experienced Track Hubs users. Join us November 28, 2018 at noon EST for an NCBI Minute explaining what GDV’s Track Hubs are and how they can help you in your research. Register … Continue reading
Posted by in Genome Data Viewer, NCBI Minute, webinars, What's New
See improvements in NCBI’s genome visualization and analysis tools at ASHG
In 2016, NCBI introduced the Genome Data Viewer (GDV). This past May, the GDV replaced the aging Map Viewer. Over the past year, NCBI has kept you updated about GDV through announcements, webinars, and blogs. Now you can gather information … Continue reading
Posted by in ASHG, Coordinate Remapping Service, GDV, Genome Data Viewer, Genome Decoration, Sequence Viewer, What's New