Gender and tenure diversity and Github teams (from #UCDavis)


Thanks to the UC Davis College of Engineering Twitter Feed for pointing me to this


The paper behind this is available as a preprint here.

Abstract:
Software development is usually a collaborative venture. Open Source Software (OSS) projects are no exception; in- deed, by design, the OSS approach can accommodate teams that are more open, geographically distributed, and dynamic than commercial teams. This, we find, leads to OSS teams that are quite diverse. Team diversity, predominantly in of- fline groups, is known to correlate with team output, mostly with positive effects. How about in OSS? 
Using GITHUB, the largest publicly available collection of OSS projects, we studied how gender and tenure diversity relate to team productivity and turnover. Using regression modeling of GITHUB data and the results of a survey, we show that both gender and tenure diversity are positive and significant predictors of productivity, together explaining a sizable fraction of the data variability. These results can inform decision making on all levels, leading to better out- comes in recruiting and performance.
Really, really fascinating.

Talk for UC Davis Pre-Health Meeting (#UCDPHSA): Opening up to Diversity

Sunday I gave a talk at the "12th National UC Davis Pre-Health Student Alliance Pre-Medical and Pre-Health Professions Conference".  I normally try to not give talks on weekends (to spend time with my family) but I made an exception here since this meeting has a strong commitment to issues relating to diversity in health and STEM fields.  This mission statement for the meeting reads:
The UC Davis Pre-Health Student Alliance’s objective is to introduce and support academic, admission, and preparatory opportunities for all students interested in health professions with a focus on those underrepresented in healthcare (with regard to gender, economic, social, educational, linguistic, cultural, racial, and ethnic background). We target universities, community colleges and high schools throughout the United States. The UC Davis Pre-Health Student Alliance aims to impact health education, increase diversity amongst the healthcare workforce, and inspire future leaders of healthcare through hosting the largest national pre-health professions conference.
It was that mission statement that got me to ditch my wife and kids Sunday AM (and also much of Saturday PM for a dinner and to work on my talk).  I went to a dinner Saturday for some of the speakers with the new Dean of the UC Davis School of Medicine Julie Freischlag.  The dinner had about 20 or so people and I met some quite interesting folks there working on various aspects of human and animal health.

And then Sunday AM I got up early, decided to use slides (was not sure) and finished off the slide set I had worked on the night before.  I decided that, in the spirit of the meeting, I would talk about two main things - diversity and access.  And I planned to tell three stories about my work in this area.  I wove in some personal stories since, at the dinner the night before Barbara Ross-Lee (who I sat next to) helped remind me of the importance of making talks personal.  So in the end I talked about myself, diabetes, diversity of microbes, antibiotics, diversity in STEM, and open science.  I came up with a title I was OK with: Opening up to Diversity.

My talk went well, I think.  I am pretty sure it was vbideotaped but not sure where that recording will end up. I did however post my slides to slideshare.  See below:



Opening up to Diversity talk by @phylogenomics at #UCDPHSA from Jonathan Eisen

And I also recorded the talk using Camtasia (basically, it allows recording of the screen, the video camera on my computer, and the audio).  I posted the recording (without the video feed which shows mostly my neck) to Youtube.  See below:




UPDATE 10/16 -

I have scanned in my notes that I made in planning this talk.  Figured, why not post them.















Update: 12/10/2014 - just discovered a video of the talk was posted to Youtube 




Not protesting this commencement address: Nancy Hopkins at BU on Gender Bias in STEM

Thank you Paula Olsiewski for pointing me to this: Boston University’s 141st Commencement Baccalaureate Address: Nancy Hopkins.  It is the text of the commencement address that Nancy Hopkins gave at BU on Monday.  And it is really worth reading.  Or watching.

And fortunately BU has posted video of the talk




In the talk Hopkins discusses her work in biology and the subtle and overt gender bias she has seen. Hopkins is quite an amazing person. For more about her see
Also see a talk by Hopkins at U. Chicago from 2011 at a colloqiuium on advancing women in science and engineering. 








STEM Women: How Men Can Help, w/ Professor Jonathan Eisen (hey, that’s me)

Just got done with an interview "STEM Women: How Men Can Help, with Professor Jonathan Eisen" done via Google Hangout with Buddhini Samarasinghe and Zuleyka Zavallos.

Video of the chat has been posted to Youtube.

 

And there is a Google Plus Event Page here.

Technology vs Poverty

Image courtesy of Carl Parkes

Image courtesy of Carl Parkes

Technology and poverty seem to be intrinsically at odds with one another. Technology is a luxury, right? While the “smartphone” has been hugely influential in wealthy nations, simple pay as you go cell phones have also transformed poor, rural areas and they are being used to monitor market prices of crops via text messages. This critical information can help a farmer decide what to bring to market and where, to get the best prices. The stripped down basic cell phone could greatly improve a farmer’s income. It’s possible that science and technology could be key components in alleviating poverty all over the world.

India, which is home to 1/3 of the world’ poor, is trying to use science and technology to improve the quality of life in a variety of ways. To make their education system more competitive globally, they are challenging electronics companies to develop prototypes of a $50 tablet so that the government can provide 5 million tablets to improve student’s learning. The National Knowledge Network is establishing the infrastructure for high-speed internet to link all villages in India. These basic technologies will broaden the reach of education and improve the prospects for employment for all.

Other projects use science to address very basic needs. Scientists are improving access to drinking water by analyzing underground flow with monitored isotopes. This helps villagers establish wells at the most optimal position. Other scientists are hard at work developing vaccines that are affordable and targeted to diseases that thrive in impoverished areas with poor sanitation like hepatitis B and rotavirus.

Jairam Ramesh, the leader of the Ministry of Rural Development, has a conservative view of the role that science plays in bringing Indians out of poverty. He says that while science can solve some problems, there are deeper issues in the diffusion of knowledge and societal barriers to change. It’s important to use technology to provide what help it can, but there will need to be a social and policy component to the attack on poverty.

How can we encourage scientists to work on issues critical to poverty vs. those issues that will garner a Cell, Science or Nature paper? Why aren’t those issues one and the same? Some institutions, like the Bill and Melinda Gates Foundation, are tackling these issues and beginning to see return on their investment. Hopefully, researchers and inventors will continue to increase their investment in technologies that can alleviate the detriments of poverty.

 


STEM Flame War!

Image courtesy of Brookhaven National Laboratory

Image courtesy of Brookhaven National Laboratory

It’s not often that you find a number of online comments on a scientific journal’s website. It’s even rarer to discover something that is bordering on a scientist flame war (complete with requests for evidence!). Colin Macilwain asserts in a recent editorial in Nature that he thinks programs to encourage STEM education are a spectacular waste of money. Now this particular stance is already going to incite some backlash. He says that all the overlapping programs are wasting money and that making more scientists will just depress wages by flooding the market.

What ensues in the comments section is a debate over whether increasing scientific literacy for all is important in today’s society and whether there is truly a shortage of qualified scientists to fill open positions. I was excited to see so many scientists engaged in discussion of STEM policy and with well articulated opinions on the subject. Not everyone agrees on the ultimate goal of STEM education, whether it be to raise the level of science literacy universally or to increase the number of students who go on to careers in science. As it is, there is a glut of biologists who are struggling to find employment, though I think fields like computer science may not be experiencing the same problems. I personally, don’t agree with Macilwain, but I think more scientists should be thinking about science and society and participating in the discussion. Science literacy for all!


Classing it up

William Curtis School (Adolf Cluss, 1875), O Street, NW between 32 and 33rd Streets. Razed 1951. DCPS Archives

William Curtis School (Adolf Cluss, 1875), O Street, NW between 32 and 33rd Streets. Razed 1951. DCPS Archives

Those of you out there who went to graduate school, try to think back to the early days….I know the PTSD makes it difficult, but try to remember the beginning of graduate school. Do you remember the required classes that you had to take?  These classes were a mostly a hodge podge of random professors talking about either their own work, or a concept they may not even be familiar with. I read a Commentary in the journal Cell the other day that gives me hope that schools will consider modifying their graduate curriculum and spend more time on teaching.

The Commentary focuses on changes that are being made to the graduate curriculum at Harvard in their umbrella biological science program. One change they are making is offering short format skill building courses. These short courses can cover a technical skill, experimental design, presentation skills or quantitative methods. This is a great way to offer focused instruction on a particular concept and deliver it to those who are interested. While they are offering the new short form classes, they are also revising their long format core courses. The diverse departments are now focusing more on key concepts and skills and sacrificing the mechanistic details. They are even bringing “clickers” (a handheld device a student uses to answer professor’s questions anonymously in real-time) to graduate school, as many newly entering students have been using these all throughout undergrad (I am old, and have never used a clicker other than to change the channels on my grandma’s TV).

I’m particularly excited about a program they are enacting for post-docs called the Curriculum Fellows Program. These fellows interface with the instructors and graduate students helping to manage courses, develop curriculum, implement teaching technology, and evaluate new techniques. This would be a great opportunity for a post-doc interested in teaching and education research. While many PhDs get some teaching experience, this would be a way to really look at the science of learning and make a contribution in improving the program. I’m happy to see that schools are taking note that the times are changing and just slapping together some classes isn’t going to cut it any more.


Storified tweets from the #UCDavisADVANCE Symposium on Increasing Diversity of STEM Faculty

I live tweeted a symposium at UC Davis yesterday that was part of the UC Davis ADVANCE project to increase diversity of STEM Faculty. Here are the notes.

 

For more on the project see

STEAM = Robot poetry dioramas

Yes, interactive robot poetry dioramas (by MindShift). I went to high school in the wrong decade. Though, I did once have an animatronic element on my Science Fair board (studying circadian rhythm in gerbils).

*Hat tip to SpongeLab.